EnhancerDB
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  3. rs555245178[chr1:24894672]
Enhancers that have rs555245178[chr1:24894672]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 24883605 24896815 enh11621
Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Stomach Placenta Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs555245178[chr1:24894672]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 24894663 24894678 TFAP2A JASPAR yes 27511860
chr1 24894666 24894678 TFAP2A JASPAR yes 27511861
chr1 24894666 24894678 TFAP2B JASPAR yes 27511862
chr1 24894666 24894678 TFAP2C JASPAR yes 27511863
chr1 24894666 24894681 TFAP2A JASPAR yes 27511864
chr1 24894667 24894676 TFAP2A JASPAR yes 27511865
chr1 24894668 24894677 TFAP2A JASPAR yes 27511866
chr1 24894670 24894685 NR2C2 JASPAR yes 27511867
chr1 24894671 24894686 HNF4A JASPAR yes 27511868
Genes associated with rs555245178[chr1:24894672], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More