EnhancerDB
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  3. rs555347086[chr13:110494273]
Enhancers that have rs555347086[chr13:110494273]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110485765 110495384 enh30697
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Colon (HCT116) Muscle (Myoblast) Pancreas Stomach
Transcript factors that have rs555347086[chr13:110494273]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110493658 110494286 TCF7L2 GTRD no Colon (HCT116) 21604933
chr13 110494252 110494273 IRF1 JASPAR yes 60300686
chr13 110494266 110494277 CDX2 JASPAR yes 60300688
chr13 110494267 110494278 HOXA10 JASPAR yes 60300690
chr13 110494268 110494277 CDX1 JASPAR yes 60300691
chr13 110494268 110494278 HOXA13 JASPAR yes 60300692
chr13 110494268 110494278 HOXB13 JASPAR yes 60300693
chr13 110494268 110494278 HOXD13 JASPAR yes 60300694
chr13 110494270 110494284 IRF7 JASPAR yes 60300695
chr13 110494271 110494286 STAT2 JASPAR yes 60300696
chr13 110494273 110494294 IRF1 JASPAR yes 60300697
Genes associated with rs555347086[chr13:110494273], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More