EnhancerDB
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  3. rs555485978[chr2:68956409]
Enhancers that have rs555485978[chr2:68956409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 68933685 68961875 enh5631
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Placenta Peripheral Blood (MM.1S) Adrenal Blood (Karpas-422) Spleen Thymus Stomach
Transcript factors that have rs555485978[chr2:68956409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 68956399 68956410 CDX2 JASPAR yes 74791428
chr2 68956400 68956411 HOXA10 JASPAR yes 74791429
chr2 68956400 68956411 HOXC11 JASPAR yes 74791430
chr2 68956400 68956411 HOXC12 JASPAR yes 74791431
chr2 68956400 68956411 HOXC13 JASPAR yes 74791432
chr2 68956400 68956411 HOXD12 JASPAR yes 74791433
chr2 68956401 68956410 CDX1 JASPAR yes 74791434
chr2 68956401 68956411 HOXA13 JASPAR yes 74791435
chr2 68956401 68956411 HOXB13 JASPAR yes 74791436
chr2 68956401 68956411 HOXC10 JASPAR yes 74791437
chr2 68956401 68956411 HOXD11 JASPAR yes 74791438
chr2 68956401 68956411 HOXD13 JASPAR yes 74791439
chr2 68956405 68956411 TBP TRANSFAC yes 74791440
Genes associated with rs555485978[chr2:68956409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More