EnhancerDB
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  3. rs555546729[chr6:35458067]
Enhancers that have rs555546729[chr6:35458067]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35452065 35462935 enh23179
Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Thyroid Pancreas Heart
chr6 35457129 35460603 vista1429
VISTA
chr6 35457906 35458213 vista51714
VISTA
Transcript factors that have rs555546729[chr6:35458067]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35457753 35458209 JUND UCSC Txn Factor no Conserved 107693926
chr6 35457753 35458209 JUND UCSC Txn Factor no Conserved 108539857
chr6 35457911 35458133 SRF UCSC Txn Factor no Conserved 107693927
chr6 35457911 35458133 SRF UCSC Txn Factor no Conserved 108539858
chr6 35458048 35458067 REST JASPAR yes 22258632
chr6 35458048 35458067 REST JASPAR yes 70352765
chr6 35458048 35458067 REST JASPAR yes 101286653
chr6 35458051 35458072 ZNF263 JASPAR yes 22258633
chr6 35458051 35458072 ZNF263 JASPAR yes 70352766
chr6 35458051 35458072 ZNF263 JASPAR yes 101286654
chr6 35458065 35458075 ZNF740 JASPAR yes 22258634
chr6 35458065 35458075 ZNF740 JASPAR yes 70352767
chr6 35458065 35458075 ZNF740 JASPAR yes 101286655
Genes associated with rs555546729[chr6:35458067], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr6 35800743 35889119 - SRPK1 ENSG00000096063.10 35889119 342676 Esophagus 0.10871 6517
chr6 35436185 35438562 + RPL10A ENSG00000198755.6 35436185 19505 Spleen 0.00409112 6508