EnhancerDB
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  3. rs555676773[chr16:88532245]
Enhancers that have rs555676773[chr16:88532245]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs555676773[chr16:88532245]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 21736463
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222245
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222246
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222247
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 21736464
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 108222248
chr16 88528769 88536119 ZNF143 GTRD no Epithelial (MCF-7) 108222249
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 21736465
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 108222250
chr16 88531369 88536196 TCF7L2 GTRD no Colon (HCT116) 108222251
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 21736466
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 108222252
chr16 88531379 88536175 TCF7L2 GTRD no Colon (HCT116) 108222253
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 21736467
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 108222254
chr16 88531399 88536192 TCF7L2 GTRD no Colon (HCT116) 108222255
chr16 88531407 88535944 TCF7L2 GTRD no Colon (HCT116) 21736468
chr16 88531407 88535944 TCF7L2 GTRD no Colon (HCT116) 108222256
chr16 88531563 88536071 TCF7L2 GTRD no Colon (HCT116) 21736469
chr16 88531563 88536071 TCF7L2 GTRD no Colon (HCT116) 108222257
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 21736470
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 108222258
chr16 88531862 88536133 TCF7L2 GTRD no Colon (HCT116) 108222259
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 21736471
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 108222260
chr16 88531995 88536183 TCF7L2 GTRD no Colon (HCT116) 108222261
chr16 88532242 88532251 VENTX JASPAR yes 12287381
Genes associated with rs555676773[chr16:88532245], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More