EnhancerDB
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  3. rs555716797[chr1:42098989]
Enhancers that have rs555716797[chr1:42098989]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42077298 42108035 enh11792
Prostate (PC-3) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Muscle (Myoblast) Pancreas Spleen Thymus Heart
Transcript factors that have rs555716797[chr1:42098989]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42098981 42098994 DUXA JASPAR yes 28403731
chr1 42098982 42098993 DUX4 JASPAR yes 28403732
chr1 42098982 42098993 PHOX2A JASPAR yes 28403733
chr1 42098982 42098993 PROP1 JASPAR yes 28403734
Genes associated with rs555716797[chr1:42098989], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More