EnhancerDB
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  3. rs555869469[chr3:129554238]
Enhancers that have rs555869469[chr3:129554238]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 129553540 129559250 enh70841
Brain (SK-N-MC) Ovary Muscle (A673) Lung (PC-9) Neural Stem Cells (H9)
Transcript factors that have rs555869469[chr3:129554238]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 129554233 129554243 POU6F2 JASPAR yes 5693467
chr3 129554234 129554244 ALX3 JASPAR yes 5693468
chr3 129554234 129554244 EMX1 JASPAR yes 5693469
chr3 129554234 129554244 EMX2 JASPAR yes 5693470
chr3 129554234 129554244 ESX1 JASPAR yes 5693471
chr3 129554234 129554244 EVX1 JASPAR yes 5693472
chr3 129554234 129554244 EVX2 JASPAR yes 5693473
chr3 129554234 129554244 GBX1 JASPAR yes 5693474
chr3 129554234 129554244 GSX1 JASPAR yes 5693475
chr3 129554234 129554244 HOXA2 JASPAR yes 5693476
chr3 129554234 129554244 HOXB2 JASPAR yes 5693477
chr3 129554234 129554244 LHX2 JASPAR yes 5693478
chr3 129554234 129554244 MEOX1 JASPAR yes 5693479
chr3 129554234 129554244 NOTO JASPAR yes 5693480
chr3 129554235 129554243 LBX1 JASPAR yes 5693481
chr3 129554235 129554243 PDX1 JASPAR yes 5693482
chr3 129554235 129554243 VAX1 JASPAR yes 5693483
chr3 129554235 129554243 VAX2 JASPAR yes 5693484
chr3 129554235 129554243 VSX1 JASPAR yes 5693485
chr3 129554235 129554243 VSX2 JASPAR yes 5693486
Genes associated with rs555869469[chr3:129554238], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More