EnhancerDB
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  3. rs555945480[chr1:200400297]
Enhancers that have rs555945480[chr1:200400297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs555945480[chr1:200400297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 21363463
chr1 200397423 200403660 AR GTRD no Prostate (PC-3) 107855280
chr1 200399861 200400386 ZNF143 GTRD no Epithelial (MCF-7) 21363465
chr1 200400253 200401136 ZNF143 GTRD no Epithelial (MCF-7) 21363466
chr1 200400278 200400298 ESR1 JASPAR yes 34446175
chr1 200400283 200400299 ZNF143 JASPAR yes 34446176
chr1 200400288 200400298 SP1 JASPAR yes 34446177
chr1 200400291 200400300 HIC2 JASPAR yes 34446178
Genes associated with rs555945480[chr1:200400297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More