EnhancerDB
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  3. rs556021473[chr1:54016534]
Enhancers that have rs556021473[chr1:54016534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 54003983 54020120 enh26706
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Bone (Osteoblast) Lung (PC-9) Pancreas Uterus Thymus
Transcript factors that have rs556021473[chr1:54016534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 54016519 54016535 POU4F3 JASPAR yes 28936967
chr1 54016520 54016535 FOXA1 JASPAR yes 28936968
chr1 54016521 54016535 POU4F1 JASPAR yes 28936970
chr1 54016521 54016536 FOXP1 JASPAR yes 28936971
chr1 54016521 54016536 HNF1A JASPAR yes 28936972
chr1 54016522 54016534 FOXC2 JASPAR yes 28936973
chr1 54016522 54016536 ONECUT2 JASPAR yes 28936974
chr1 54016522 54016536 ONECUT3 JASPAR yes 28936975
chr1 54016523 54016534 FOXB1 JASPAR yes 28936976
chr1 54016523 54016534 FOXC1 JASPAR yes 28936977
chr1 54016523 54016534 PROP1 JASPAR yes 28936978
chr1 54016524 54016539 FOXA1 JASPAR yes 28936980
chr1 54016525 54016537 FOXI1 JASPAR yes 28936981
chr1 54016525 54016540 FOXP1 JASPAR yes 28936982
chr1 54016526 54016538 FOXC2 JASPAR yes 28936983
chr1 54016526 54016540 ONECUT2 JASPAR yes 28936984
chr1 54016526 54016540 ONECUT3 JASPAR yes 28936985
chr1 54016527 54016538 FOXB1 JASPAR yes 28936986
chr1 54016527 54016538 FOXC1 JASPAR yes 28936987
chr1 54016530 54016542 FOXC2 JASPAR yes 28936989
chr1 54016532 54016536 YY1 TRANSFAC yes 28936990
Genes associated with rs556021473[chr1:54016534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More