EnhancerDB
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  3. rs556357540[chr6:105879706]
Enhancers that have rs556357540[chr6:105879706]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 105873845 105883855 enh23449
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Astrocyte Lung (A549) Placenta Thyroid Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Epithelial (MCF-7)
Transcript factors that have rs556357540[chr6:105879706]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 105879695 105879707 HLF JASPAR yes 103948708
chr6 105879700 105879721 IRF1 JASPAR yes 103948710
chr6 105879701 105879722 IRF1 JASPAR yes 103948711
chr6 105879702 105879717 STAT2 JASPAR yes 103948712
chr6 105879703 105879724 IRF1 JASPAR yes 103948713
chr6 105879705 105879720 FOXP1 JASPAR yes 103948714
chr6 105879706 105879721 FOXP1 JASPAR yes 103948715
Genes associated with rs556357540[chr6:105879706], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More