EnhancerDB
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  3. rs556399244[chr17:79460405]
Enhancers that have rs556399244[chr17:79460405]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79444325 79464275 enh32379
Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (A549) Muscle (A673) Thyroid Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs556399244[chr17:79460405]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79459767 79460484 ZBTB33 GTRD no Lung (A549) 21798175
chr17 79459828 79460412 ZBTB33 GTRD no Lung (A549) 21798177
chr17 79459851 79460513 ZBTB33 GTRD no Lung (A549) 21798178
chr17 79459926 79460605 ZBTB33 GTRD no Lung (A549) 21798182
chr17 79460267 79461691 ZBTB33 GTRD no Lung (A549) 21798186
chr17 79460327 79462319 ZBTB33 GTRD no Lung (A549) 21798187
chr17 79460404 79460413 NKX3-2 JASPAR yes 56331787
chr17 79460405 79460413 ISL2 JASPAR yes 56331788
Genes associated with rs556399244[chr17:79460405], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More