EnhancerDB
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  3. rs556429248[chr12:122946447]
Enhancers that have rs556429248[chr12:122946447]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs556429248[chr12:122946447]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122943600 122946552 TCF7L2 GTRD no Colon (HCT116) 21579912
chr12 122945751 122948057 ZNF274 GTRD no Cervix (HeLa-S3) 21579935
chr12 122945819 122947514 AR GTRD no Prostate (PC-3) 21579936
chr12 122945822 122947922 P63 GTRD no Skin (Keratinocyte) 21579937
chr12 122945903 122947419 ZNF274 GTRD no Cervix (HeLa-S3) 21579938
chr12 122946164 122947531 P63 GTRD no Skin (Keratinocyte) 21579939
chr12 122946180 122948160 ZNF143 GTRD no Epithelial (MCF-7) 21579940
chr12 122946184 122947613 TCF7L2 GTRD no Colon (HCT116) 21579941
chr12 122946200 122947923 ZNF274 GTRD no Cervix (HeLa-S3) 21579942
chr12 122946230 122948036 ZNF274 GTRD no Cervix (HeLa-S3) 21579943
chr12 122946260 122948033 ZNF274 GTRD no Cervix (HeLa-S3) 21579944
chr12 122946275 122947913 ZNF143 GTRD no Epithelial (MCF-7) 21579945
chr12 122946306 122947874 ZNF143 GTRD no Epithelial (MCF-7) 21579946
chr12 122946323 122946883 ZNF143 GTRD no Epithelial (MCF-7) 21579947
chr12 122946350 122947542 P63 GTRD no Skin (Keratinocyte) 21579948
chr12 122946356 122947356 ZNF274 GTRD no Cervix (HeLa-S3) 21579949
chr12 122946365 122947394 ZNF274 GTRD no Cervix (HeLa-S3) 21579950
chr12 122946418 122947208 ZNF143 GTRD no Epithelial (MCF-7) 21579951
chr12 122946442 122947399 P63 GTRD no Skin (Keratinocyte) 21579952
chr12 122946443 122947306 ZNF143 GTRD no Epithelial (MCF-7) 21579953
chr12 122946445 122946454 ZEB1 JASPAR yes 124282240
chr12 122946445 122946460 SCRT1 JASPAR yes 124282241
chr12 122946446 122946456 FIGLA JASPAR yes 124282242
chr12 122946446 122946456 ID4 JASPAR yes 124282243
chr12 122946446 122946456 MSC JASPAR yes 124282244
chr12 122946446 122946456 TCF3 JASPAR yes 124282245
chr12 122946446 122946456 TCF4 JASPAR yes 124282246
chr12 122946447 122946456 SNAI2 JASPAR yes 124282247
chr12 122946447 122946460 SCRT2 JASPAR yes 124282248
Genes associated with rs556429248[chr12:122946447], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More