EnhancerDB
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  3. rs556440988[chr6:26320535]
Enhancers that have rs556440988[chr6:26320535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 26299985 26325244 enh55702
Prostate (PC-3) Liver (HepG2) Large Intestine Prostate (RWPE1) Blood (OCI-LY7) Blood (GM12878) Colon (HCT116) Peripheral Blood (MM.1S) Pancreas Uterus
Transcript factors that have rs556440988[chr6:26320535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 26320519 26320540 IRF1 JASPAR yes 100894811
chr6 26320520 26320535 FOXP1 JASPAR yes 100894812
chr6 26320520 26320541 IRF1 JASPAR yes 100894813
chr6 26320521 26320536 FOXP1 JASPAR yes 100894814
chr6 26320521 26320542 IRF1 JASPAR yes 100894815
chr6 26320522 26320537 FOXP1 JASPAR yes 100894816
chr6 26320522 26320543 IRF1 JASPAR yes 100894817
chr6 26320523 26320538 FOXP1 JASPAR yes 100894818
chr6 26320523 26320544 IRF1 JASPAR yes 100894819
chr6 26320524 26320539 FOXP1 JASPAR yes 100894820
chr6 26320524 26320545 IRF1 JASPAR yes 100894821
chr6 26320525 26320540 FOXP1 JASPAR yes 100894822
chr6 26320527 26320542 FOXP1 JASPAR yes 100894823
chr6 26320528 26320549 IRF1 JASPAR yes 100894824
chr6 26320529 26320544 FOXP1 JASPAR yes 100894825
chr6 26320529 26320550 IRF1 JASPAR yes 100894826
chr6 26320533 26320554 IRF1 JASPAR yes 100894827
chr6 26320534 26320549 FOXP1 JASPAR yes 100894828
chr6 26320534 26320555 IRF1 JASPAR yes 100894829
chr6 26320535 26320556 IRF1 JASPAR yes 100894830
Genes associated with rs556440988[chr6:26320535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More