EnhancerDB
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  3. rs556481917[chr1:200301175]
Enhancers that have rs556481917[chr1:200301175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs556481917[chr1:200301175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200301171 200301182 FOXA1 JASPAR yes 34435356
chr1 200301171 200301186 FOXA1 JASPAR yes 34435357
chr1 200301172 200301183 FOXB1 JASPAR yes 34435358
chr1 200301172 200301183 FOXC1 JASPAR yes 34435359
chr1 200301172 200301184 FOXC2 JASPAR yes 34435360
chr1 200301173 200301184 FOXP2 JASPAR yes 34435361
chr1 200301174 200301182 FOXO3 JASPAR yes 34435362
chr1 200301175 200301182 FOXD2 JASPAR yes 34435363
chr1 200301175 200301182 FOXI1 JASPAR yes 34435364
chr1 200301175 200301182 FOXL1 JASPAR yes 34435365
chr1 200301175 200301182 FOXO4 JASPAR yes 34435366
chr1 200301175 200301182 FOXO6 JASPAR yes 34435367
chr1 200301175 200301182 FOXP3 JASPAR yes 34435368
chr1 200301175 200301183 FOXD1 JASPAR yes 34435369
chr1 200301175 200301183 FOXG1 JASPAR yes 34435370
chr1 200301175 200301183 FOXO3 JASPAR yes 34435371
Genes associated with rs556481917[chr1:200301175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More