-
Home
- SNP
- rs556530686[chr17:4950086]
Enhancers that have rs556530686[chr17:4950086]
Back to top
Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
chr17 |
4943525 |
4953191 |
enh16947 |
|
|
Transcript factors that have rs556530686[chr17:4950086]
Back to top
Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
chr17
|
4937718
|
4952244
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232977
|
|
chr17
|
4938065
|
4952339
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232978
|
|
chr17
|
4938151
|
4951908
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232979
|
|
chr17
|
4938378
|
4952219
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232980
|
|
chr17
|
4938664
|
4951395
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232981
|
|
chr17
|
4941728
|
4952048
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232982
|
|
chr17
|
4941773
|
4951839
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232983
|
|
chr17
|
4941838
|
4951988
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232984
|
|
chr17
|
4941857
|
4952218
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232985
|
|
chr17
|
4941868
|
4952157
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232986
|
|
chr17
|
4941963
|
4951397
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232987
|
|
chr17
|
4942068
|
4952085
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232988
|
|
chr17
|
4942838
|
4951498
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232989
|
|
chr17
|
4942952
|
4951516
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108232990
|
|
chr17
|
4943170
|
4951774
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232991
|
|
chr17
|
4943273
|
4952277
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232992
|
|
chr17
|
4943834
|
4952255
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232993
|
|
chr17
|
4943967
|
4952151
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108232994
|
|
chr17
|
4944043
|
4952298
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232995
|
|
chr17
|
4945909
|
4951512
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108232996
|
|
chr17
|
4945965
|
4952106
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740561
|
|
chr17
|
4945965
|
4952106
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108232997
|
|
chr17
|
4945971
|
4952100
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232998
|
|
chr17
|
4945977
|
4951752
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108232999
|
|
chr17
|
4946357
|
4952279
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233000
|
|
chr17
|
4946366
|
4951078
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233001
|
|
chr17
|
4946387
|
4951240
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233002
|
|
chr17
|
4946589
|
4951681
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233003
|
|
chr17
|
4946785
|
4951717
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233004
|
|
chr17
|
4946794
|
4952101
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233005
|
|
chr17
|
4946847
|
4951234
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233006
|
|
chr17
|
4946866
|
4952144
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233007
|
|
chr17
|
4946998
|
4952129
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233008
|
|
chr17
|
4947003
|
4951208
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233009
|
|
chr17
|
4947015
|
4951959
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
21740562
|
|
chr17
|
4947015
|
4951959
|
STAT3
|
GTRD
|
no
|
Blood (OCI-LY7)
|
108233010
|
|
chr17
|
4947035
|
4951782
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233011
|
|
chr17
|
4947068
|
4951285
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233012
|
|
chr17
|
4947072
|
4951243
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233013
|
|
chr17
|
4947075
|
4950923
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740563
|
|
chr17
|
4947075
|
4950923
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233014
|
|
chr17
|
4947078
|
4951958
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233015
|
|
chr17
|
4947084
|
4950999
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233016
|
|
chr17
|
4947103
|
4952014
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233017
|
|
chr17
|
4947105
|
4951294
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740564
|
|
chr17
|
4947105
|
4951294
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233018
|
|
chr17
|
4947111
|
4951018
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740565
|
|
chr17
|
4947111
|
4951018
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233019
|
|
chr17
|
4947116
|
4951354
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740566
|
|
chr17
|
4947116
|
4951354
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233020
|
|
chr17
|
4947136
|
4951479
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233021
|
|
chr17
|
4947176
|
4951395
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233022
|
|
chr17
|
4947201
|
4950968
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108233023
|
|
chr17
|
4947231
|
4952212
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233024
|
|
chr17
|
4947264
|
4951418
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233025
|
|
chr17
|
4947268
|
4951440
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233026
|
|
chr17
|
4947291
|
4951454
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233027
|
|
chr17
|
4947318
|
4951497
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233028
|
|
chr17
|
4947341
|
4951643
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233029
|
|
chr17
|
4947344
|
4951292
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233030
|
|
chr17
|
4947359
|
4951143
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233031
|
|
chr17
|
4947362
|
4951400
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233032
|
|
chr17
|
4947399
|
4951405
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233033
|
|
chr17
|
4947455
|
4951145
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233034
|
|
chr17
|
4947458
|
4950974
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233035
|
|
chr17
|
4947488
|
4951256
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233036
|
|
chr17
|
4947502
|
4951383
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233037
|
|
chr17
|
4947507
|
4950950
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
108233038
|
|
chr17
|
4947507
|
4951395
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
108233039
|
|
chr17
|
4947689
|
4951383
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233040
|
|
chr17
|
4948266
|
4951514
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233041
|
|
chr17
|
4948270
|
4951313
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233042
|
|
chr17
|
4948322
|
4951386
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233043
|
|
chr17
|
4948329
|
4951847
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740567
|
|
chr17
|
4948329
|
4951847
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233044
|
|
chr17
|
4948351
|
4951312
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233045
|
|
chr17
|
4948385
|
4951493
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233046
|
|
chr17
|
4948974
|
4951315
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740568
|
|
chr17
|
4948974
|
4951315
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233047
|
|
chr17
|
4949277
|
4951286
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740569
|
|
chr17
|
4949277
|
4951286
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233048
|
|
chr17
|
4949344
|
4951247
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233049
|
|
chr17
|
4949356
|
4951381
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233050
|
|
chr17
|
4949528
|
4951695
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233051
|
|
chr17
|
4949544
|
4951045
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233052
|
|
chr17
|
4949724
|
4951179
|
ZNF274
|
GTRD
|
no
|
Liver (HepG2)
|
108233053
|
|
chr17
|
4950031
|
4951407
|
ZBTB33
|
GTRD
|
no
|
Brain (SK-N-SH)
|
108233054
|
|
chr17
|
4950064
|
4952247
|
ZBTB33
|
GTRD
|
no
|
Lung (A549)
|
108233055
|
|
chr17
|
4950073
|
4952059
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
21740570
|
|
chr17
|
4950073
|
4952059
|
ZNF274
|
GTRD
|
no
|
Bone Marrow (K562)
|
108233056
|
|
chr17
|
4950080
|
4950091
|
FOXH1
|
JASPAR
|
yes
|
|
52864802
|
|
chr17
|
4950081
|
4950087
|
ZNF354C
|
JASPAR
|
yes
|
|
52864803
|
|
chr17
|
4950081
|
4951307
|
ZNF274
|
GTRD
|
no
|
Blood (GM12878)
|
108233057
|
|
chr17
|
4950081
|
4951436
|
ZNF274
|
GTRD
|
no
|
Cervix (HeLa-S3)
|
108233058
|
|
Genes associated with rs556530686[chr17:4950086], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |