EnhancerDB
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  3. rs55666671[chr4:5000249]
Enhancers that have rs55666671[chr4:5000249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr4 4990025 5000915 enh21328
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Bone (Osteoblast) Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs55666671[chr4:5000249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr4 5000239 5000254 MEF2C JASPAR yes 87983457
chr4 5000240 5000251 HOXA10 JASPAR yes 87983458
chr4 5000240 5000251 HOXC11 JASPAR yes 87983459
chr4 5000240 5000255 MEF2A JASPAR yes 87983460
chr4 5000241 5000250 CDX1 JASPAR yes 87983461
chr4 5000241 5000251 HOXC10 JASPAR yes 87983462
chr4 5000241 5000251 HOXD11 JASPAR yes 87983463
chr4 5000241 5000253 MEF2A JASPAR yes 87983464
chr4 5000241 5000253 MEF2B JASPAR yes 87983465
chr4 5000241 5000253 MEF2D JASPAR yes 87983466
chr4 5000242 5000252 MEF2A JASPAR yes 87983467
Genes associated with rs55666671[chr4:5000249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More