EnhancerDB
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  3. rs55670582[chr1:234042168]
Enhancers that have rs55670582[chr1:234042168]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234037855 234054675 enh27630
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Astrocyte Colon (HCT116) Lung (PC-9) Pancreas (Panc1)
Transcript factors that have rs55670582[chr1:234042168]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234042161 234042171 CUX1 JASPAR yes 36245821
chr1 234042161 234042171 CUX2 JASPAR yes 36245822
chr1 234042161 234042171 PAX3 JASPAR yes 36245823
chr1 234042161 234042171 PAX7 JASPAR yes 36245824
chr1 234042163 234042172 VENTX JASPAR yes 36245825
chr1 234042163 234042173 HESX1 JASPAR yes 36245826
chr1 234042163 234042173 LBX2 JASPAR yes 36245827
chr1 234042163 234042173 MIXL1 JASPAR yes 36245828
chr1 234042163 234042173 RAX JASPAR yes 36245829
chr1 234042164 234042172 LHX9 JASPAR yes 36245830
chr1 234042164 234042172 SHOX JASPAR yes 36245831
Genes associated with rs55670582[chr1:234042168], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More