EnhancerDB
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  3. rs556812540[chr1:178575945]
Enhancers that have rs556812540[chr1:178575945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178572424 178586155 enh756
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Neural Stem Cells (H9) Thymus
Transcript factors that have rs556812540[chr1:178575945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 178575630 178575954 ZNF274 GTRD no Blood (GM12878) 21352645
chr1 178575652 178576522 ZNF274 GTRD no Blood (GM12878) 21352646
chr1 178575742 178576191 ZNF274 GTRD no Blood (GM12878) 21352647
chr1 178575766 178576445 ZNF274 GTRD no Cervix (HeLa-S3) 21352648
chr1 178575810 178576369 ZNF274 GTRD no Blood (GM12878) 21352649
chr1 178575872 178576296 ZNF274 GTRD no Blood (GM12878) 21352650
chr1 178575879 178576276 ZNF274 GTRD no Blood (GM12878) 21352651
chr1 178575879 178576395 ZNF274 GTRD no Blood (GM12878) 21352652
chr1 178575892 178576275 ZNF274 GTRD no Blood (GM12878) 21352653
Genes associated with rs556812540[chr1:178575945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More