EnhancerDB
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Enhancers that have rs55696541[chr19:770528]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 766416 774574 enh32870
Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Muscle (Myotube) Stomach
Transcript factors that have rs55696541[chr19:770528]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 769496 771860 TCF7L2 GTRD no Colon (HCT116) 21829728
chr19 769657 772471 TCF7L2 GTRD no Colon (HCT116) 21829729
chr19 769715 770874 TCF7L2 GTRD no Colon (HCT116) 21829730
chr19 769728 770761 TCF7L2 GTRD no Colon (HCT116) 21829731
chr19 769933 770872 ZNF274 GTRD no Cervix (HeLa-S3) 21829732
chr19 770142 771764 ZNF274 GTRD no Cervix (HeLa-S3) 21829733
chr19 770179 770621 ZNF274 GTRD no Cervix (HeLa-S3) 21829734
chr19 770191 770601 ZNF274 GTRD no Cervix (HeLa-S3) 21829735
chr19 770206 770626 ZNF274 GTRD no Cervix (HeLa-S3) 21829736
chr19 770210 770708 TCF7L2 GTRD no Colon (HCT116) 21829737
chr19 770214 770678 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829738
chr19 770217 770793 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829739
chr19 770231 770886 ZNF274 GTRD no Cervix (HeLa-S3) 21829740
chr19 770233 770629 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829741
chr19 770255 770615 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21829742
chr19 770262 770634 ZNF274 GTRD no Cervix (HeLa-S3) 21829743
chr19 770295 770737 ZNF274 GTRD no Cervix (HeLa-S3) 21829744
chr19 770298 770636 ZNF274 GTRD no Cervix (HeLa-S3) 21829745
chr19 770304 770684 ZNF274 GTRD no Cervix (HeLa-S3) 21829746
chr19 770361 770686 TCF7L2 GTRD no Colon (HCT116) 21829751
chr19 770370 770613 TCF7L2 GTRD no Colon (HCT116) 21829752
chr19 770400 771158 TCF7L2 GTRD no Colon (HCT116) 21829753
chr19 770522 770537 FOXA1 JASPAR yes 111974581
chr19 770526 770537 FOXA1 JASPAR yes 111974582
Genes associated with rs55696541[chr19:770528], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More