EnhancerDB
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  3. rs556998953[chr1:117008202]
Enhancers that have rs556998953[chr1:117008202]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117004485 117055235 enh585
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs556998953[chr1:117008202]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117008186 117008207 IRF1 JASPAR yes 31809402
chr1 117008188 117008203 STAT2 JASPAR yes 31809403
chr1 117008189 117008203 STAT1 JASPAR yes 31809404
chr1 117008193 117008208 FOXP1 JASPAR yes 31809405
Genes associated with rs556998953[chr1:117008202], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More