EnhancerDB
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  3. rs55710629[chr7:108057030]
Enhancers that have rs55710629[chr7:108057030]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr7 108052305 108070455 enh40477
Brain (SK-N-SH) Brain (SK-N-MC) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Peripheral Blood (MM.1S) Adrenal Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs55710629[chr7:108057030]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr7 108057019 108057034 HNF1A JASPAR yes 17137806
chr7 108057020 108057033 HNF1B JASPAR yes 17137807
chr7 108057020 108057036 POU4F3 JASPAR yes 17137808
chr7 108057023 108057033 GSX2 JASPAR yes 17137809
chr7 108057023 108057033 HOXB2 JASPAR yes 17137810
chr7 108057023 108057033 HOXB3 JASPAR yes 17137811
chr7 108057023 108057033 MNX1 JASPAR yes 17137812
chr7 108057023 108057033 POU6F1 JASPAR yes 17137813
chr7 108057023 108057034 HOXA10 JASPAR yes 17137814
chr7 108057024 108057032 LMX1A JASPAR yes 17137815
chr7 108057024 108057032 LMX1B JASPAR yes 17137816
chr7 108057024 108057032 NKX6-1 JASPAR yes 17137817
chr7 108057024 108057032 NKX6-2 JASPAR yes 17137818
chr7 108057024 108057032 VAX1 JASPAR yes 17137819
chr7 108057024 108057032 VAX2 JASPAR yes 17137820
chr7 108057024 108057032 VSX1 JASPAR yes 17137821
chr7 108057024 108057032 VSX2 JASPAR yes 17137822
chr7 108057026 108057047 IRF1 JASPAR yes 17137823
chr7 108057027 108057042 FOXP1 JASPAR yes 17137824
chr7 108057029 108057035 TBP TRANSFAC yes 17137825
chr7 108057030 108057045 STAT2 JASPAR yes 17137826
Genes associated with rs55710629[chr7:108057030], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More