EnhancerDB
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  3. rs557109223[chr12:54145812]
Enhancers that have rs557109223[chr12:54145812]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 54135485 54153565 enh2372
Cervix (HeLa-S3) Ovary Blood (GM12878) Muscle (A673) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Pancreas (Panc1) Uterus
Transcript factors that have rs557109223[chr12:54145812]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 54144262 54146466 EZH2 UCSC Txn Factor no Conserved 108036534
chr12 54145128 54146257 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549573
chr12 54145128 54146257 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036537
chr12 54145342 54145942 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549580
chr12 54145342 54145942 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036548
chr12 54145415 54146205 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108036557
chr12 54145429 54146045 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21549585
chr12 54145429 54146045 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108036558
chr12 54145809 54145814 SP1 TRANSFAC yes 121004401
chr12 54145809 54145815 SP1 TRANSFAC yes 121004402
chr12 54145812 54145832 RREB1 JASPAR yes 121004403
Genes associated with rs557109223[chr12:54145812], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More