EnhancerDB
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  3. rs557141885[chr1:116873738]
Enhancers that have rs557141885[chr1:116873738]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 116846225 116879811 enh580
Bone Marrow (K562) Brain (SK-N-MC) Liver Blood (Karpas-422) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs557141885[chr1:116873738]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 116873548 116875268 ZNF274 GTRD no Bone Marrow (K562) 21332188
chr1 116873614 116873959 ZNF274 GTRD no Liver (HepG2) 21332189
chr1 116873727 116873740 SCRT2 JASPAR yes 31795997
chr1 116873727 116873742 SCRT1 JASPAR yes 31795998
chr1 116873731 116873744 NR2F1 JASPAR yes 31795999
chr1 116873733 116873747 RXRG JASPAR yes 31796000
chr1 116873735 116873739 ESR1 TRANSFAC yes 31796001
Genes associated with rs557141885[chr1:116873738], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More