EnhancerDB
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  3. rs55714377[chr9:116274934]
Enhancers that have rs55714377[chr9:116274934]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 116271022 116291415 enh42202
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Blood (T-cell) Esophagus Astrocyte Lung Stomach Thyroid Peripheral Blood (MM.1S) Pancreas Thymus Heart
chr9 116274593 116274965 vista63054
VISTA
Transcript factors that have rs55714377[chr9:116274934]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 116274565 116275047 RUNX3 UCSC Txn Factor no Conserved 108551575
chr9 116274654 116275081 RELA UCSC Txn Factor no Conserved 108551576
chr9 116274740 116275090 EBF1 UCSC Txn Factor no Conserved 108551577
chr9 116274926 116274941 SCRT1 JASPAR yes 86419432
chr9 116274926 116274941 SCRT1 JASPAR yes 95402852
chr9 116274927 116274937 FIGLA JASPAR yes 86419433
chr9 116274927 116274937 MSC JASPAR yes 86419434
chr9 116274927 116274937 FIGLA JASPAR yes 95402853
chr9 116274927 116274937 MSC JASPAR yes 95402854
chr9 116274928 116274937 SNAI2 JASPAR yes 86419435
chr9 116274928 116274937 SNAI2 JASPAR yes 95402855
chr9 116274929 116274934 USF2 TRANSFAC yes 86419436
chr9 116274929 116274934 USF2 TRANSFAC yes 95402856
chr9 116274929 116274943 PLAG1 JASPAR yes 86419437
chr9 116274929 116274943 PLAG1 JASPAR yes 95402857
chr9 116274930 116274936 PTF TRANSFAC yes 86419438
chr9 116274930 116274936 PTF TRANSFAC yes 95402858
Genes associated with rs55714377[chr9:116274934], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More