EnhancerDB
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  3. rs557166796[chr1:19394553]
Enhancers that have rs557166796[chr1:19394553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 19387183 19402059 enh57498
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Lung (A549) Stomach Muscle (A673) Thyroid Lung (PC-9) Pancreas Heart
Transcript factors that have rs557166796[chr1:19394553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 19394544 19394554 NFIA JASPAR yes 27176504
chr1 19394545 19394554 NFIX JASPAR yes 27176505
chr1 19394548 19394558 ID4 JASPAR yes 27176507
chr1 19394548 19394558 TCF4 JASPAR yes 27176508
chr1 19394550 19394555 USF2 TRANSFAC yes 27176509
Genes associated with rs557166796[chr1:19394553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More