EnhancerDB
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  3. rs557238088[chr1:20195170]
Enhancers that have rs557238088[chr1:20195170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 20185005 20201495 enh11577
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Muscle (A673) Placenta Lung (PC-9) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs557238088[chr1:20195170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 20195150 20195171 IRF1 JASPAR yes 27223777
chr1 20195154 20195175 IRF1 JASPAR yes 27223778
chr1 20195155 20195170 FOXP1 JASPAR yes 27223779
chr1 20195155 20195176 IRF1 JASPAR yes 27223780
chr1 20195156 20195171 FOXP1 JASPAR yes 27223781
chr1 20195156 20195177 IRF1 JASPAR yes 27223782
chr1 20195160 20195181 IRF1 JASPAR yes 27223783
chr1 20195161 20195176 FOXP1 JASPAR yes 27223784
chr1 20195161 20195182 IRF1 JASPAR yes 27223785
chr1 20195165 20195186 IRF1 JASPAR yes 27223786
chr1 20195166 20195181 FOXP1 JASPAR yes 27223787
Genes associated with rs557238088[chr1:20195170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More