EnhancerDB
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  3. rs55729107[chr2:232582085]
Enhancers that have rs55729107[chr2:232582085]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232576396 232588237 enh6203
Prostate (PC-3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Muscle (A673) Placenta Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Neural Stem Cells (H9) Heart
chr2 232582048 232582308 vista35183
VISTA
Transcript factors that have rs55729107[chr2:232582085]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232581916 232582306 MAX UCSC Txn Factor no Conserved 108435760
chr2 232581984 232582266 USF1 UCSC Txn Factor no Conserved 108435761
chr2 232581997 232582287 USF2 UCSC Txn Factor no Conserved 108435762
chr2 232582013 232582236 NFYB UCSC Txn Factor no Conserved 108435763
chr2 232582074 232582089 TFAP2A JASPAR yes 22230501
chr2 232582074 232582089 TFAP2A JASPAR yes 81739645
chr2 232582077 232582089 TFAP2A JASPAR yes 22230502
chr2 232582077 232582089 TFAP2B JASPAR yes 22230503
chr2 232582077 232582089 TFAP2C JASPAR yes 22230504
chr2 232582077 232582089 TFAP2A JASPAR yes 81739646
chr2 232582077 232582089 TFAP2B JASPAR yes 81739647
chr2 232582077 232582089 TFAP2C JASPAR yes 81739648
chr2 232582077 232582092 TFAP2A JASPAR yes 22230505
chr2 232582077 232582092 TFAP2A JASPAR yes 81739649
Genes associated with rs55729107[chr2:232582085], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More