EnhancerDB
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  3. rs55752990[chr17:66313615]
Enhancers that have rs55752990[chr17:66313615]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 66304425 66317755 enh4558
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs55752990[chr17:66313615]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 66313305 66314807 ZBTB33 GTRD no Brain (SK-N-SH) 108286845
chr17 66313391 66314960 ZBTB33 GTRD no Brain (SK-N-SH) 108286846
chr17 66313410 66314897 ZBTB33 GTRD no Brain (SK-N-SH) 108286847
chr17 66313518 66314900 ZBTB33 GTRD no Brain (SK-N-SH) 108286848
chr17 66313576 66314979 ZBTB33 GTRD no Brain (SK-N-SH) 108286849
chr17 66313595 66313616 IRF1 JASPAR yes 55568133
chr17 66313600 66313621 IRF1 JASPAR yes 55568136
chr17 66313601 66313616 FOXP1 JASPAR yes 55568138
chr17 66313602 66313617 STAT2 JASPAR yes 55568141
chr17 66313603 66313618 FOXP1 JASPAR yes 55568142
chr17 66313605 66313620 FOXP1 JASPAR yes 55568143
chr17 66313606 66313621 FOXP1 JASPAR yes 55568144
chr17 66313607 66313622 FOXP1 JASPAR yes 55568145
chr17 66313608 66313623 FOXP1 JASPAR yes 55568146
Genes associated with rs55752990[chr17:66313615], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More