EnhancerDB
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  3. rs55767424[chr16:88525486]
Enhancers that have rs55767424[chr16:88525486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88521345 88553535 enh4185
Bone Marrow (K562) Brain (SK-N-SH) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Liver Blood (T-cell) Lung Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Pancreas Thymus Heart
Transcript factors that have rs55767424[chr16:88525486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 21736458
chr16 88521149 88529068 TCF7L2 GTRD no Colon (HCT116) 108222237
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 21736463
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222245
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222246
chr16 88524147 88537001 ZNF143 GTRD no Epithelial (MCF-7) 108222247
chr16 88525476 88525496 TP63 JASPAR yes 12286329
chr16 88525477 88525495 TP63 JASPAR yes 12286330
chr16 88525477 88525495 TP73 JASPAR yes 12286331
chr16 88525478 88525493 TP53 JASPAR yes 12286332
Genes associated with rs55767424[chr16:88525486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More