EnhancerDB
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  3. rs557684847[chr19:3175717]
Enhancers that have rs557684847[chr19:3175717]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3170105 3178875 enh17860
Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Breast Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs557684847[chr19:3175717]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 21838666
chr19 3175622 3177729 ZNF274 GTRD no Cervix (HeLa-S3) 108365292
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 21838667
chr19 3175642 3177810 ZNF274 GTRD no Cervix (HeLa-S3) 108365293
chr19 3175698 3177785 ZNF274 GTRD no Blood (GM12878) 108365294
chr19 3175704 3175718 EBF1 JASPAR yes 112115217
chr19 3175706 3175717 EBF1 JASPAR yes 112115219
chr19 3175714 3175724 ID4 JASPAR yes 112115220
chr19 3175714 3175724 MSC JASPAR yes 112115221
chr19 3175714 3175724 TCF3 JASPAR yes 112115222
chr19 3175714 3177730 ZNF274 GTRD no Blood (GM12878) 108365295
chr19 3175715 3175724 SNAI2 JASPAR yes 112115223
chr19 3175716 3175721 USF2 TRANSFAC yes 112115224
chr19 3175716 3177551 ZNF274 GTRD no Blood (GM12878) 108365296
Genes associated with rs557684847[chr19:3175717], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More