EnhancerDB
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  3. rs557787202[chr1:42130399]
Enhancers that have rs557787202[chr1:42130399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42121525 42155124 enh11793
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs557787202[chr1:42130399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42130392 42130404 INSM1 JASPAR yes 28407156
chr1 42130392 42130404 TFAP2A JASPAR yes 28407157
chr1 42130392 42130404 TFAP2B JASPAR yes 28407158
chr1 42130392 42130404 TFAP2C JASPAR yes 28407159
chr1 42130397 42130407 SP1 JASPAR yes 28407160
chr1 42130398 42130408 SP1 JASPAR yes 28407161
Genes associated with rs557787202[chr1:42130399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More