EnhancerDB
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  3. rs55780200[chr12:107780912]
Enhancers that have rs55780200[chr12:107780912]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 107760925 107781907 enh29971
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Muscle (A673) Colon (HCT116) Lung (PC-9) Thymus
chr12 107780760 107781041 vista14788
VISTA
Transcript factors that have rs55780200[chr12:107780912]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 107780254 107780963 ZNF274 GTRD no Blood (GM12878) 108056280
chr12 107780906 107780916 SP1 JASPAR yes 82471929
chr12 107780906 107780916 SP1 JASPAR yes 123553486
chr12 107780909 107780914 SP1 TRANSFAC yes 82471930
chr12 107780909 107780914 SP1 TRANSFAC yes 123553487
Genes associated with rs55780200[chr12:107780912], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More