EnhancerDB
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Enhancers that have rs557880476[chr17:3865529]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 3856865 3866455 enh4218
Prostate (PC-3) Brain (SK-N-SH) Large Intestine Blood (OCI-LY7) Lung (A549) Stomach Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Pancreas Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs557880476[chr17:3865529]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 3864737 3865890 ZBTB33 GTRD no Lung (A549) 21739918
chr17 3864795 3866722 TCF7L2 GTRD no Colon (HCT116) 21739920
chr17 3864835 3866849 ZNF143 GTRD no Epithelial (MCF-7) 21739921
chr17 3865101 3865694 ZBTB33 GTRD no Brain (SK-N-SH) 21739922
chr17 3865155 3865769 ZBTB33 GTRD no Brain (SK-N-SH) 21739923
chr17 3865223 3865709 TCF7L2 GTRD no Colon (HCT116) 21739924
chr17 3865225 3865596 ZBTB33 GTRD no Brain (SK-N-SH) 21739925
chr17 3865246 3865556 ZBTB33 GTRD no Brain (SK-N-SH) 21739926
chr17 3865350 3866278 TCF7L2 GTRD no Colon (HCT116) 21739927
chr17 3865464 3866135 TCF7L2 GTRD no Colon (HCT116) 21739928
Genes associated with rs557880476[chr17:3865529], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More