EnhancerDB
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  3. rs55788203[chr5:172186860]
Enhancers that have rs55788203[chr5:172186860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs55788203[chr5:172186860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172186857 172186877 RREB1 JASPAR yes 67823378
chr5 172186859 172186874 FOXP1 JASPAR yes 67823379
chr5 172186860 172186875 FOXP1 JASPAR yes 67823380
Genes associated with rs55788203[chr5:172186860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More