EnhancerDB
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  3. rs557913045[chr1:220544788]
Enhancers that have rs557913045[chr1:220544788]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220534493 220550315 enh12681
Prostate (PC-3) Kidney Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Brain (SK-N-MC) Esophagus Astrocyte Brain (SK-N-SH) Bone (Osteoblast) Muscle (A673) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs557913045[chr1:220544788]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220544740 220545645 ZNF143 GTRD no Epithelial (MCF-7) 21381703
chr1 220544744 220545589 ZNF143 GTRD no Epithelial (MCF-7) 21381704
chr1 220544770 220544788 ESR1 JASPAR yes 35489530
chr1 220544771 220544788 ESR1 JASPAR yes 35489531
chr1 220544771 220544789 ESR2 JASPAR yes 35489532
chr1 220544772 220544792 ESR1 JASPAR yes 35489534
chr1 220544782 220544794 TFAP2A JASPAR yes 35489535
chr1 220544782 220544797 TFAP2A JASPAR yes 35489536
chr1 220544783 220544792 TFAP2A JASPAR yes 35489537
chr1 220544787 220545017 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381705
chr1 220544787 220545037 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21381706
Genes associated with rs557913045[chr1:220544788], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More