EnhancerDB
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  3. rs557917270[chr12:122935366]
Enhancers that have rs557917270[chr12:122935366]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs557917270[chr12:122935366]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122935020 122935730 TCF7L2 GTRD no Colon (HCT116) 21579816
chr12 122935055 122935812 ZNF274 GTRD no Cervix (HeLa-S3) 21579817
chr12 122935063 122935681 ZNF143 GTRD no Epithelial (MCF-7) 21579818
chr12 122935134 122935755 TCF7L2 GTRD no Colon (HCT116) 21579819
chr12 122935140 122935594 TCF7L2 GTRD no Colon (HCT116) 21579820
chr12 122935300 122935885 ZNF143 GTRD no Epithelial (MCF-7) 21579821
chr12 122935354 122935374 ESR1 JASPAR yes 124280513
chr12 122935357 122935375 ESR2 JASPAR yes 124280514
chr12 122935359 122935374 ESR2 JASPAR yes 124280515
chr12 122935363 122935368 MYC TRANSFAC yes 124280516
Genes associated with rs557917270[chr12:122935366], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More