EnhancerDB
  1. Home
  2. SNP
  3. rs557971696[chr1:172949951]
Enhancers that have rs557971696[chr1:172949951]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172934137 172951875 enh12379
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Thymus Stomach
Transcript factors that have rs557971696[chr1:172949951]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172949677 172949953 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21350839
chr1 172949946 172949958 PKNOX2 JASPAR yes 33174981
chr1 172949946 172949958 TGIF1 JASPAR yes 33174982
chr1 172949946 172949959 ZBTB18 JASPAR yes 33174983
chr1 172949947 172949957 CLOCK JASPAR yes 33174984
Genes associated with rs557971696[chr1:172949951], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More