EnhancerDB
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  3. rs557974980[chr1:17227427]
Enhancers that have rs557974980[chr1:17227427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17219841 17243115 enh90
Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas (Panc1) Uterus Thymus
Transcript factors that have rs557974980[chr1:17227427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17227427 17227439 TFAP2C JASPAR yes 27063526
chr1 17227427 17227442 TFAP2A JASPAR yes 27063527
Genes associated with rs557974980[chr1:17227427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More