EnhancerDB
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  3. rs558152012[chr12:122940427]
Enhancers that have rs558152012[chr12:122940427]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs558152012[chr12:122940427]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122939828 122940785 ZNF143 GTRD no Epithelial (MCF-7) 21579844
chr12 122939930 122940494 TCF7L2 GTRD no Colon (HCT116) 21579845
chr12 122939984 122940469 ZNF143 GTRD no Epithelial (MCF-7) 21579846
chr12 122940037 122940562 ZNF143 GTRD no Epithelial (MCF-7) 21579847
chr12 122940411 122940432 ZNF263 JASPAR yes 124281262
chr12 122940415 122940985 TCF7L2 GTRD no Colon (HCT116) 21579848
chr12 122940422 122940432 SREBF2 JASPAR yes 124281263
chr12 122940422 122940432 TBX21 JASPAR yes 124281264
chr12 122940422 122940433 TBX20 JASPAR yes 124281265
chr12 122940422 122940433 TBX2 JASPAR yes 124281266
chr12 122940422 122940435 EOMES JASPAR yes 124281267
chr12 122940423 122940431 MGA JASPAR yes 124281268
chr12 122940423 122940433 TBR1 JASPAR yes 124281269
Genes associated with rs558152012[chr12:122940427], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More