EnhancerDB
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  3. rs55824135[chr16:88568477]
Enhancers that have rs55824135[chr16:88568477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88556185 88579980 enh52393
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Stomach Muscle (A673) Colon (HCT116) Pancreas Heart
Transcript factors that have rs55824135[chr16:88568477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88568471 88568487 POU4F2 JASPAR yes 12291790
chr16 88568471 88568487 POU4F3 JASPAR yes 12291791
chr16 88568472 88568487 FOXA1 JASPAR yes 12291793
chr16 88568473 88568485 FOXI1 JASPAR yes 12291794
chr16 88568473 88568487 POU4F1 JASPAR yes 12291795
chr16 88568473 88568488 FOXP1 JASPAR yes 12291796
chr16 88568473 88568488 HNF1A JASPAR yes 12291797
chr16 88568474 88568486 FOXC2 JASPAR yes 12291798
chr16 88568474 88568488 ONECUT2 JASPAR yes 12291799
chr16 88568474 88568488 ONECUT3 JASPAR yes 12291800
chr16 88568475 88568486 FOXB1 JASPAR yes 12291801
chr16 88568475 88568486 FOXC1 JASPAR yes 12291802
chr16 88568475 88568486 PROP1 JASPAR yes 12291803
chr16 88568475 88568491 POU4F2 JASPAR yes 12291804
chr16 88568475 88568491 POU4F3 JASPAR yes 12291805
chr16 88568476 88568480 YY1 TRANSFAC yes 12291806
chr16 88568476 88568491 FOXA1 JASPAR yes 12291807
chr16 88568477 88568489 FOXI1 JASPAR yes 12291808
chr16 88568477 88568491 POU4F1 JASPAR yes 12291809
chr16 88568477 88568492 FOXP1 JASPAR yes 12291810
chr16 88568477 88568492 HNF1A JASPAR yes 12291811
Genes associated with rs55824135[chr16:88568477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More