EnhancerDB
  1. Home
  2. SNP
  3. rs558252926[chr1:200310681]
Enhancers that have rs558252926[chr1:200310681]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200297972 200315295 enh868
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs558252926[chr1:200310681]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200309825 200310868 ZNF143 GTRD no Epithelial (MCF-7) 21363143
chr1 200310286 200310882 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21363144
chr1 200310352 200310856 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363145
chr1 200310413 200310789 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21363146
chr1 200310667 200310688 ZNF263 JASPAR yes 34436907
Genes associated with rs558252926[chr1:200310681], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More