EnhancerDB
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  3. rs558296009[chr13:110352371]
Enhancers that have rs558296009[chr13:110352371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 110345405 110354940 enh30695
Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Large Intestine Liver Astrocyte Muscle (A673) Lung (PC-9) Muscle (Myoblast) Stomach
Transcript factors that have rs558296009[chr13:110352371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 110351762 110353892 ZNF143 GTRD no Epithelial (MCF-7) 108088744
chr13 110351762 110353892 ZNF143 GTRD no Epithelial (MCF-7) 108088745
chr13 110352353 110352373 RREB1 JASPAR yes 60287414
chr13 110352354 110352375 IRF1 JASPAR yes 60287415
chr13 110352358 110352378 RREB1 JASPAR yes 60287419
chr13 110352359 110352380 IRF1 JASPAR yes 60287420
chr13 110352360 110352375 FOXP1 JASPAR yes 60287422
chr13 110352361 110352376 STAT2 JASPAR yes 60287423
chr13 110352363 110352375 IRF1 JASPAR yes 60287424
chr13 110352363 110352377 IRF7 JASPAR yes 60287425
chr13 110352363 110352378 IRF9 JASPAR yes 60287426
chr13 110352363 110352383 RREB1 JASPAR yes 60287427
chr13 110352364 110352384 RREB1 JASPAR yes 60287428
chr13 110352364 110352385 IRF1 JASPAR yes 60287429
chr13 110352365 110352371 TCF4 TRANSFAC yes 60287430
chr13 110352365 110352380 FOXP1 JASPAR yes 60287431
chr13 110352370 110352385 FOXA1 JASPAR yes 60287432
chr13 110352371 110352377 TCF4 TRANSFAC yes 60287433
chr13 110352371 110352383 FOXI1 JASPAR yes 60287434
chr13 110352371 110352386 FOXP1 JASPAR yes 60287435
Genes associated with rs558296009[chr13:110352371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More