EnhancerDB
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  3. rs558296809[chr16:19397206]
Enhancers that have rs558296809[chr16:19397206]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 19385025 19410955 enh16592
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs558296809[chr16:19397206]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 19395056 19398140 ZNF143 GTRD no Epithelial (MCF-7) 21695421
chr16 19395273 19397957 ZNF143 GTRD no Epithelial (MCF-7) 21695424
chr16 19395360 19397935 ZNF143 GTRD no Epithelial (MCF-7) 21695426
chr16 19395407 19397842 ZNF143 GTRD no Epithelial (MCF-7) 21695429
chr16 19395620 19397270 ZNF143 GTRD no Epithelial (MCF-7) 21695449
chr16 19396005 19397556 ZNF274 GTRD no Cervix (HeLa-S3) 21695465
chr16 19396136 19397247 ZNF274 GTRD no Cervix (HeLa-S3) 21695467
chr16 19396446 19397897 ZNF274 GTRD no Cervix (HeLa-S3) 21695475
chr16 19396449 19397722 ZNF274 GTRD no Cervix (HeLa-S3) 21695476
chr16 19396510 19397232 ZNF274 GTRD no Cervix (HeLa-S3) 21695482
chr16 19396528 19397224 ZNF143 GTRD no Epithelial (MCF-7) 21695483
chr16 19396528 19397228 ZNF274 GTRD no Cervix (HeLa-S3) 21695484
chr16 19397193 19397212 CTCF JASPAR yes 9865048
chr16 19397199 19397220 ZNF263 JASPAR yes 9865049
chr16 19397206 19397223 ESR1 JASPAR yes 9865050
chr16 19397206 19397224 ESR2 JASPAR yes 9865051
Genes associated with rs558296809[chr16:19397206], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More