EnhancerDB
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  3. rs55829933[chr5:172185556]
Enhancers that have rs55829933[chr5:172185556]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172182745 172195855 enh8880
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Thymus Stomach
Transcript factors that have rs55829933[chr5:172185556]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172185552 172185563 FLI1 JASPAR yes 67823156
chr5 172185553 172185566 ELF1 JASPAR yes 67823157
chr5 172185556 172185577 MAFG JASPAR yes 67823158
Genes associated with rs55829933[chr5:172185556], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More