EnhancerDB
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  3. rs558309173[chr1:200493025]
Enhancers that have rs558309173[chr1:200493025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200491362 200502415 enh27419
Brain (SK-N-MC) Blood (T-cell) Astrocyte Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs558309173[chr1:200493025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200493004 200493025 IRF1 JASPAR yes 34456525
chr1 200493005 200493025 RREB1 JASPAR yes 34456528
chr1 200493009 200493029 RREB1 JASPAR yes 34456531
chr1 200493010 200493025 FOXP1 JASPAR yes 34456533
chr1 200493010 200493030 RREB1 JASPAR yes 34456534
chr1 200493013 200493033 RREB1 JASPAR yes 34456535
chr1 200493014 200493034 RREB1 JASPAR yes 34456536
chr1 200493017 200493029 FOXI1 JASPAR yes 34456538
chr1 200493017 200493032 FOXP1 JASPAR yes 34456539
chr1 200493021 200493033 FOXI1 JASPAR yes 34456540
chr1 200493025 200493037 FOXI1 JASPAR yes 34456541
Genes associated with rs558309173[chr1:200493025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More