EnhancerDB
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  3. rs558402059[chr1:200411024]
Enhancers that have rs558402059[chr1:200411024]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 200395745 200424875 enh27417
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Astrocyte Peripheral Blood (MM.1S) Lung (PC-9) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs558402059[chr1:200411024]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 200407168 200412701 ZNF143 GTRD no Epithelial (MCF-7) 21363483
chr1 200408336 200411190 ZNF274 GTRD no Cervix (HeLa-S3) 21363489
chr1 200408540 200411056 ZNF143 GTRD no Epithelial (MCF-7) 21363491
chr1 200408560 200411134 ZNF143 GTRD no Epithelial (MCF-7) 21363493
chr1 200408739 200412574 ZNF143 GTRD no Epithelial (MCF-7) 21363494
chr1 200408818 200411179 ZNF143 GTRD no Epithelial (MCF-7) 21363496
chr1 200408953 200411978 ZNF143 GTRD no Epithelial (MCF-7) 21363500
chr1 200409204 200411131 ZNF143 GTRD no Epithelial (MCF-7) 21363504
chr1 200409247 200411391 ZNF143 GTRD no Epithelial (MCF-7) 21363505
chr1 200409421 200411119 ZNF143 GTRD no Epithelial (MCF-7) 21363507
chr1 200409616 200411331 ZNF143 GTRD no Epithelial (MCF-7) 21363513
chr1 200409813 200411025 ZNF274 GTRD no Cervix (HeLa-S3) 21363518
chr1 200409823 200411025 ZNF274 GTRD no Cervix (HeLa-S3) 21363519
chr1 200410061 200411061 ZNF143 GTRD no Epithelial (MCF-7) 21363522
chr1 200410069 200411601 ZNF143 GTRD no Epithelial (MCF-7) 21363523
chr1 200410253 200411441 ZNF143 GTRD no Epithelial (MCF-7) 21363524
chr1 200410266 200411129 ZNF143 GTRD no Epithelial (MCF-7) 21363525
chr1 200410313 200411148 ZNF143 GTRD no Epithelial (MCF-7) 21363526
chr1 200410330 200411297 ZNF143 GTRD no Epithelial (MCF-7) 21363527
chr1 200410356 200411150 ZNF143 GTRD no Epithelial (MCF-7) 21363528
chr1 200410433 200411346 ZNF143 GTRD no Epithelial (MCF-7) 21363529
chr1 200410452 200411242 ZNF143 GTRD no Epithelial (MCF-7) 21363531
chr1 200410463 200411274 ZNF143 GTRD no Epithelial (MCF-7) 21363532
chr1 200410479 200411418 ZNF143 GTRD no Epithelial (MCF-7) 21363533
chr1 200410482 200411453 ZNF143 GTRD no Epithelial (MCF-7) 21363534
chr1 200410497 200411113 ZNF143 GTRD no Epithelial (MCF-7) 21363535
chr1 200410510 200411082 ZNF143 GTRD no Epithelial (MCF-7) 21363537
chr1 200410546 200411155 ZNF143 GTRD no Epithelial (MCF-7) 21363538
chr1 200410573 200411305 ZNF143 GTRD no Epithelial (MCF-7) 21363539
chr1 200410638 200411095 ZNF143 GTRD no Epithelial (MCF-7) 21363540
chr1 200410646 200411339 ZNF143 GTRD no Epithelial (MCF-7) 21363541
chr1 200410671 200411047 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21363542
chr1 200411010 200411026 ZNF143 JASPAR yes 34447859
Genes associated with rs558402059[chr1:200411024], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More