EnhancerDB
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  3. rs558480356[chr1:165826157]
Enhancers that have rs558480356[chr1:165826157]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 165800587 165834795 enh699
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs558480356[chr1:165826157]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 165826136 165826157 IRF1 JASPAR yes 32804474
chr1 165826137 165826158 IRF1 JASPAR yes 32804476
chr1 165826138 165826159 IRF1 JASPAR yes 32804478
chr1 165826140 165826161 IRF1 JASPAR yes 32804481
chr1 165826141 165826162 IRF1 JASPAR yes 32804483
chr1 165826142 165826157 FOXP1 JASPAR yes 32804484
chr1 165826143 165826158 FOXP1 JASPAR yes 32804485
chr1 165826144 165826159 FOXP1 JASPAR yes 32804486
chr1 165826145 165826160 FOXP1 JASPAR yes 32804487
chr1 165826147 165826162 FOXP1 JASPAR yes 32804488
chr1 165826147 165826168 IRF1 JASPAR yes 32804489
chr1 165826149 165826164 FOXP1 JASPAR yes 32804490
Genes associated with rs558480356[chr1:165826157], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More