EnhancerDB
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  3. rs558568966[chr1:42208694]
Enhancers that have rs558568966[chr1:42208694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 42199705 42213143 enh290
Prostate (PC-3) Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Thymus Stomach
Transcript factors that have rs558568966[chr1:42208694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 42208681 42208696 JUND JASPAR yes 28416306
chr1 42208684 42208699 JUND JASPAR yes 28416307
chr1 42208685 42208698 JUN JASPAR yes 28416308
chr1 42208694 42208709 FOXP1 JASPAR yes 28416309
Genes associated with rs558568966[chr1:42208694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More