EnhancerDB
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  3. rs558693879[chr1:8096134]
Enhancers that have rs558693879[chr1:8096134]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8089365 8111955 enh11459
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs558693879[chr1:8096134]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8088588 8098693 TCF7L2 GTRD no Colon (HCT116) 21325212
chr1 8096121 8096136 HNF1A JASPAR yes 26502677
chr1 8096122 8096135 HNF1B JASPAR yes 26502678
chr1 8096122 8096136 POU4F1 JASPAR yes 26502679
chr1 8096122 8096138 POU4F2 JASPAR yes 26502680
chr1 8096122 8096138 POU4F3 JASPAR yes 26502681
chr1 8096123 8096135 HNF1B JASPAR yes 26502682
Genes associated with rs558693879[chr1:8096134], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More