EnhancerDB
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  3. rs558917910[chr12:122935265]
Enhancers that have rs558917910[chr12:122935265]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122929045 122955735 enh15070
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Blood (OCI-LY7) Placenta Colon (HCT116) Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs558917910[chr12:122935265]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122935020 122935730 TCF7L2 GTRD no Colon (HCT116) 21579816
chr12 122935055 122935812 ZNF274 GTRD no Cervix (HeLa-S3) 21579817
chr12 122935063 122935681 ZNF143 GTRD no Epithelial (MCF-7) 21579818
chr12 122935134 122935755 TCF7L2 GTRD no Colon (HCT116) 21579819
chr12 122935140 122935594 TCF7L2 GTRD no Colon (HCT116) 21579820
chr12 122935265 122935278 NFKB1 JASPAR yes 124280508
chr12 122935265 122935278 NFKB2 JASPAR yes 124280509
Genes associated with rs558917910[chr12:122935265], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More